Protein aggregation

DATASET 1

Dataset used for Amyload

The AmyLoad website contains about 1400 unique amyloidogenic and non-amyloidogenic sequence entries.

AmyLoad

Reference: Wozniak PW, Kotulska (2015) AmyLoad: website dedicated to amyloidogenic protein fragments. Bioinformatics 31: 3395-3397.   PUBMED  

DATASET 2

Dataset used for WALTZ-DB

1089 experimentally characterized amyloid forming hexapeptides (the files are the same data in three different formats).

F1     F2     F3

Reference: Beerten J, Durme J, Gallardo R, Capriotti E, Serpell L, Rousseau F, Schymkowitz J; WALTZ-DB: a benchmark database of amyloidogenic hexapeptides, Bioinformatics, Volume 31, Issue 10, 15 May 2015, Pages 1698–1700, https://doi.org/10.1093/bioinformatics/btv027.  PUBMED  

Last updated: 2019-04-09 by Anasua Sarkar.