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CFHbase
Variation registry for Factor H deficiency

Nucleotide substitutions - CFHbase

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	5	2	1	8
G	11	2	2	21	36
C	0	11	0	38	49
T	13	18	15	0	46
Total	24	36	19	60	139

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	2	5	1	8
C	0	0	11	38	49
G	11	2	2	21	36
T	13	15	18	0	46
Total	24	19	36	60	139

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	1	2	5	8
T	13	0	15	18	46
C	0	38	0	11	49
G	11	21	2	2	36
Total	24	60	19	36	139

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	3.6	1.4	0.7	5.8
G	7.9	1.4	1.4	15.1	25.9
C	0.0	7.9	0.0	27.3	35.3
T	9.4	12.9	10.8	0.0	33.1
Total	17.3	25.9	13.7	43.2	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	1.4	3.6	0.7	5.8
C	0.0	0.0	7.9	27.3	35.3
G	7.9	1.4	1.4	15.1	25.9
T	9.4	10.8	12.9	0.0	33.1
Total	17.3	13.7	25.9	43.2	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	0.7	1.4	3.6	5.8
T	9.4	0.0	10.8	12.9	33.1
C	0.0	27.3	0.0	7.9	35.3
G	7.9	15.1	1.4	1.4	25.9
Total	17.3	43.2	13.7	25.9	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	18	26
Pyrimidine	42	53

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	12.9	18.7
Pyrimidine	30.2	38.1

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024