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CIITAbase
Variation registry for MHCII transactivating protein deficiency

Nucleotide substitutions - CIITAbase

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	0	0	0	0
G	2	0	0	1	3
C	0	0	0	0	0
T	0	0	8	0	8
Total	2	0	8	1	11

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	0	0	0	0
C	0	0	0	0	0
G	2	0	0	1	3
T	0	8	0	0	8
Total	2	8	0	1	11

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	0	0	0	0
T	0	0	8	0	8
C	0	0	0	0	0
G	2	1	0	0	3
Total	2	1	8	0	11

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	0.0	0.0	0.0	0.0
G	18.2	0.0	0.0	9.1	27.3
C	0.0	0.0	0.0	0.0	0.0
T	0.0	0.0	72.7	0.0	72.7
Total	18.2	0.0	72.7	9.1	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	0.0	0.0	0.0	0.0
C	0.0	0.0	0.0	0.0	0.0
G	18.2	0.0	0.0	9.1	27.3
T	0.0	72.7	0.0	0.0	72.7
Total	18.2	72.7	0.0	9.1	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	0.0	0.0	0.0	0.0
T	0.0	0.0	72.7	0.0	72.7
C	0.0	0.0	0.0	0.0	0.0
G	18.2	9.1	0.0	0.0	27.3
Total	18.2	9.1	72.7	0.0	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	2	1
Pyrimidine	0	8

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	18.2	9.1
Pyrimidine	0.0	72.7

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024