- databases for immunodeficiency-causing variations

Variation browser

Submit variation

CYBBbase
Variation registry for X-linked chronic granulomatous disease (XCGD)

Nucleotide substitutions - CYBBbase

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	45	19	24	88
G	229	0	34	77	340
C	66	18	0	306	390
T	23	31	62	0	116
Total	318	94	115	407	934

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	19	45	24	88
C	66	0	18	306	390
G	229	34	0	77	340
T	23	62	31	0	116
Total	318	115	94	407	934

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	24	19	45	88
T	23	0	62	31	116
C	66	306	0	18	390
G	229	77	34	0	340
Total	318	407	115	94	934

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	4.8	2.0	2.6	9.4
G	24.5	0.0	3.6	8.2	36.4
C	7.1	1.9	0.0	32.8	41.8
T	2.5	3.3	6.6	0.0	12.4
Total	34.0	10.1	12.3	43.6	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	2.0	4.8	2.6	9.4
C	7.1	0.0	1.9	32.8	41.8
G	24.5	3.6	0.0	8.2	36.4
T	2.5	6.6	3.3	0.0	12.4
Total	34.0	12.3	10.1	43.6	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	2.6	2.0	4.8	9.4
T	2.5	0.0	6.6	3.3	12.4
C	7.1	32.8	0.0	1.9	41.8
G	24.5	8.2	3.6	0.0	36.4
Total	34.0	43.6	12.3	10.1	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	274	154
Pyrimidine	138	368

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	29.3	16.5
Pyrimidine	14.8	39.4

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024