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LYSTbase
Variation registry for Chediak-Higashi syndrome

Nucleotide substitutions - LYSTbase

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	0	0	0	0
G	5	0	0	3	8
C	5	1	0	9	15
T	3	0	0	0	3
Total	13	1	0	12	26

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	0	0	0	0
C	5	0	1	9	15
G	5	0	0	3	8
T	3	0	0	0	3
Total	13	0	1	12	26

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	0	0	0	0
T	3	0	0	0	3
C	5	9	0	1	15
G	5	3	0	0	8
Total	13	12	0	1	26

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	0.0	0.0	0.0	0.0
G	19.2	0.0	0.0	11.5	30.8
C	19.2	3.8	0.0	34.6	57.7
T	11.5	0.0	0.0	0.0	11.5
Total	50.0	3.8	0.0	46.2	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	0.0	0.0	0.0	0.0
C	19.2	0.0	3.8	34.6	57.7
G	19.2	0.0	0.0	11.5	30.8
T	11.5	0.0	0.0	0.0	11.5
Total	50.0	0.0	3.8	46.2	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	0.0	0.0	0.0	0.0
T	11.5	0.0	0.0	0.0	11.5
C	19.2	34.6	0.0	3.8	57.7
G	19.2	11.5	0.0	0.0	30.8
Total	50.0	46.2	0.0	3.8	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	5	3
Pyrimidine	9	9

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	19.2	11.5
Pyrimidine	34.6	34.6

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024