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- databases for immunodeficiency-causing variations

   RFXAPbase
   Variation registry for  Regulatory factor X-associated protein deficiency


Database        RFXAPbase
Version         1.0
File            rfxappub.txt
Date            18-Jun-2007
Curator         Mauno Vihinen
Address         Protein Structure and Bioinformatics 
Address         Lund University, BMC D10, SE-22184 Lund, Sweden
Phone           +46 72 526 0022
Fax             +46 46 222 9328
Email           Mauno Vihinen
URL             http://structure.bmc.lu.se/idbase/RFXAPbase/
IDR factfile    http://structure.bmc.lu.se/idbase/IDRefSeq/xml/idr/ff/FF14.html
Gene            RFXAP
Disease         Regulatory factor X-associated protein deficiency  
OMIM            601861
GDB             9475355
Sequence        IDRefSeq:D0075; IDRefSeq:C0075; UNIprot:O00287 
Numbering       start of the entry
Funding         Tampere University Hospital Medical Research Fund
Funding         European Union
Comments        sequence entry reference in every entry
//
ID              @P12X74(1a),@P12X74(1a); standard; MUTATION;
Accession       R0006
Systematic name Allele 1 and 2: g.52509_52510insGCGGGGC, 
Systematic name c.150_151insGCGGGGC, p.P12fsX74
Original code   ShA; @G11X73
Description     Allele 1 and 2: insertion in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9536093
RefAuthors      Fondaneche, M. C., Villard, J., Wiszniewski, W., Jouanguy, 
RefAuthors      E., Etzioni, A., Le Deist, F., Peijnenburg, A., Casanova, 
RefAuthors      J. L., Reith, W., Mach, B., Fischer, A., Lisowska-
RefAuthors      Grospierre, B.
RefTitle        Genetic and molecular definition of complementation group 
RefTitle        D in MHC class II deficiency.
RefLoc          Hum Mol Genet 7:879-885 (1998)
RefNumber       [2]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [3]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: insertion
Feature           /loc: IDRefSeq: D0075: 52510
Feature           /change: +gcggggc
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 151
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 12
Feature           /change:    P 
Feature           /change: -> RGAGRRQRRA PPRGPSPGCG SHLGASLGGG RGLSIHPASD 
Feature           /change:    ATLCWAGRGC GPRGQRWGGQ ARX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: insertion
Feature           /loc: IDRefSeq: D0075: 52510
Feature           /change: +gcggggc
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 151
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 12
Feature           /change:    P 
Feature           /change: -> RGAGRRQRRA PPRGPSPGCG SHLGASLGGG RGLSIHPASD 
Feature           /change:    ATLCWAGRGC GPRGQRWGGQ ARX
Ethnic origin   Druze
Parents         Consanguineous
Relative        RFXAPbase; R0007 cousin
//
ID              @P12X74(1b),@P12X74(1b); standard; MUTATION;
Accession       R0007; @G11X73
Systematic name Allele 1 and 2: g.52509_52510insGCGGGGC, 
Systematic name c.150_151insGCGGGGC, p.P12fsX74
Original code   ShG
Description     Allele 1 and 2: insertion in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9536093
RefAuthors      Fondaneche, M. C., Villard, J., Wiszniewski, W., Jouanguy, 
RefAuthors      E., Etzioni, A., Le Deist, F., Peijnenburg, A., Casanova, 
RefAuthors      J. L., Reith, W., Mach, B., Fischer, A., Lisowska-
RefAuthors      Grospierre, B.
RefTitle        Genetic and molecular definition of complementation group 
RefTitle        D in MHC class II deficiency.
RefLoc          Hum Mol Genet 7:879-885 (1998)
RefNumber       [2]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [3]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: insertion
Feature           /loc: IDRefSeq: D0075: 52510
Feature           /change: +gcggggc
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 151
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 12
Feature           /change:    P 
Feature           /change: -> RGAGRRQRRA PPRGPSPGCG SHLGASLGGG RGLSIHPASD 
Feature           /change:    ATLCWAGRGC GPRGQRWGGQ ARX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: insertion
Feature           /loc: IDRefSeq: D0075: 52510
Feature           /change: +gcggggc
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 151
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 12
Feature           /change:    P 
Feature           /change: -> RGAGRRQRRA PPRGPSPGCG SHLGASLGGG RGLSIHPASD 
Feature           /change:    ATLCWAGRGC GPRGQRWGGQ ARX
Ethnic origin   Druze
Parents         Consanguineous
Relative        RFXAPbase; R0006 cousin
//
ID              Q55X(1),Q55X(1); standard; MUTATION;
Accession       R0002
Systematic name Allele 1 and 2: g.52638C>T, c.279C>T, p.Q55X
Original code   ABI
Description     Allele 1 and 2: point mutation in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9287230
RefAuthors      Villard, J., Lisowska-Grospierre, B., van den Elsen, P., 
RefAuthors      Fischer, A., Reith, W., Mach, B.
RefTitle        Mutation of RFXAP, a regulator of MHC class II genes, in 
RefTitle        primary MHC class II deficiency.
RefLoc          N Engl J Med 337:748-753 (1997)
RefNumber       [2]
RefCrossRef     PUBMED; 9536093
RefAuthors      Fondaneche, M. C., Villard, J., Wiszniewski, W., Jouanguy, 
RefAuthors      E., Etzioni, A., Le Deist, F., Peijnenburg, A., Casanova, 
RefAuthors      J. L., Reith, W., Mach, B., Fischer, A., Lisowska-
RefAuthors      Grospierre, B.
RefTitle        Genetic and molecular definition of complementation group 
RefTitle        D in MHC class II deficiency.
RefLoc          Hum Mol Genet 7:879-885 (1998)
RefNumber       [3]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [4]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0075: 52638
Feature           /change: c -> t
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0075: 279
Feature           /codon: cag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 55
Feature           /change: Q -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0075: 52638
Feature           /change: c -> t
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0075: 279
Feature           /codon: cag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 55
Feature           /change: Q -> X
Ethnic origin   Turkey
//
ID              Q55X(2),Q55X(2); standard; MUTATION;
Accession       R0005
Systematic name Allele 1 and 2: g.52638C>T, c.279C>T, p.Q55X
Original code   AkO
Description     Allele 1 and 2: point mutation in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9536093
RefAuthors      Fondaneche, M. C., Villard, J., Wiszniewski, W., Jouanguy, 
RefAuthors      E., Etzioni, A., Le Deist, F., Peijnenburg, A., Casanova, 
RefAuthors      J. L., Reith, W., Mach, B., Fischer, A., Lisowska-
RefAuthors      Grospierre, B.
RefTitle        Genetic and molecular definition of complementation group 
RefTitle        D in MHC class II deficiency.
RefLoc          Hum Mol Genet 7:879-885 (1998)
RefNumber       [3]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [4]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: point
Feature           /loc: IDRefSeq: D0075: 52638
Feature           /change: c -> t
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0075: 279
Feature           /codon: cag -> tag; 1
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 55
Feature           /change: Q -> X
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: point
Feature           /loc: IDRefSeq: D0075: 52638
Feature           /change: c -> t
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: nonsense
Feature           /loc: IDRefSeq: C0075: 279
Feature           /codon: cag -> tag; 1
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 55
Feature           /change: Q -> X
Ethnic origin   Turkey
Relative        Description of pedigree:Parents are heterozygous
//
ID              #S123X137(1),#S123X137(1); standard; MUTATION;
Accession       R0001
Systematic name Allele 1 and 2: g.52843delG, c.484delG, p.S123fsX137
Original code   DA; #G122X137
Description     Allele 1 and 2: deletion in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9118943
RefAuthors      Durand, B., Sperisen, P., Emery, P., Barras, E., Zufferey, 
RefAuthors      M., Mach, B., Reith, W.
RefTitle        RFXAP, a novel subunit of the RFX DNA binding complex is 
RefTitle        mutated in MHC class II deficiency.
RefLoc          EMBO J 16:1045-1055 (1997)
RefNumber       [2]
RefCrossRef     PUBMED; 9287230
RefAuthors      Villard, J., Lisowska-Grospierre, B., van den Elsen, P., 
RefAuthors      Fischer, A., Reith, W., Mach, B.
RefTitle        Mutation of RFXAP, a regulator of MHC class II genes, in 
RefTitle        primary MHC class II deficiency.
RefLoc          N Engl J Med 337:748-753 (1997)
RefNumber       [3]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [4]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
Ethnic origin   Morocco
Parents         Consanguineous
//
ID              #S123X137(2),#S123X137(2); standard; MUTATION;
Accession       R0003
Systematic name Allele 1 and 2: g.52843delG, c.484delG, p.S123fsX137
Original code   ZM; #G122X137
Description     Allele 1 and 2: deletion in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9287230
RefAuthors      Villard, J., Lisowska-Grospierre, B., van den Elsen, P., 
RefAuthors      Fischer, A., Reith, W., Mach, B.
RefTitle        Mutation of RFXAP, a regulator of MHC class II genes, in 
RefTitle        primary MHC class II deficiency.
RefLoc          N Engl J Med 337:748-753 (1997)
RefNumber       [3]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [4]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
Ethnic origin   Algeria
//
ID              #S123X137(3),#S123X137(3); standard; MUTATION;
Accession       R0004
Systematic name Allele 1 and 2: g.52843delG, c.484delG, p.S123fsX137
Original code   SS; #G122X137
Description     Allele 1 and 2: deletion in the exon 1 leading to a 
Description     premature stop codon
Date            08-Jan-2003 (Rel. 1, Created)
Date            08-Jan-2003 (Rel. 1, Last updated, Version 1)
RefNumber       [1]
RefCrossRef     PUBMED; 9536093
RefAuthors      Fondaneche, M. C., Villard, J., Wiszniewski, W., Jouanguy, 
RefAuthors      E., Etzioni, A., Le Deist, F., Peijnenburg, A., Casanova, 
RefAuthors      J. L., Reith, W., Mach, B., Fischer, A., Lisowska-
RefAuthors      Grospierre, B.
RefTitle        Genetic and molecular definition of complementation group 
RefTitle        D in MHC class II deficiency.
RefLoc          Hum Mol Genet 7:879-885 (1998)
RefNumber       [2]
RefCrossRef     PUBMED; 7951244
RefAuthors      Lisowska-Grospierre, B., Fondaneche, M. C., Rols, M. P., 
RefAuthors      Griscelli, C., Fischer, A.
RefTitle        Two complementation groups account for most cases of 
RefTitle        inherited MHC class II deficiency.
RefLoc          Hum Mol Genet 3:953-958 (1994)
RefNumber       [3]
RefCrossRef     PUBMED; 11037300
RefAuthors      Vihinen, M., Arredondo-Vega, F. X., Casanova, J. L., 
RefAuthors      Etzioni, A., Giliani, S., Hammarstrom, L., Hershfield, M. 
RefAuthors      S., Heyworth, P. G., Hsu, A. P., Lahdesmaki, A., 
RefAuthors      Lappalainen, I., Notarangelo, L. D., Puck, J. M., Reith, 
RefAuthors      W., Roos, D., Schumacher, R. F., Schwarz, K., Vezzoni, P., 
RefAuthors      Villa, A., Valiaho, J., Smith, C. I.
RefTitle        Primary immunodeficiency mutation databases.
RefLoc          Adv Genet 43:103-188 (2001)
RefNumber       [4]
RefCrossRef     PUBMED; 11704716
RefAuthors      Villard, J., Masternak, K., Lisowska-Grospierre, B., 
RefAuthors      Fischer, A., Reith, W.
RefTitle        MHC class II deficiency: a disease of gene regulation.
RefLoc          Medicine (Baltimore) 80:405-418 (2001)
FeatureHeader   allele; 1
Feature         dna; 1
Feature           /rnalink: 2
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 2
Feature           /dnalink: 1
Feature           /aalink: 3
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 3
Feature           /rnalink: 2
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
FeatureHeader   allele; 2
Feature         dna; 4
Feature           /rnalink: 5
Feature           /name: deletion
Feature           /loc: IDRefSeq: D0075: 52843
Feature           /change: -g
Feature           /genomic_region: exon; 1
Feature         rna; 5
Feature           /dnalink: 4
Feature           /aalink: 6
Feature           /name: frameshift
Feature           /loc: IDRefSeq: C0075: 484
Feature         aa; 6
Feature           /rnalink: 5
Feature           /name: out of frame translation; premature termination
Feature           /loc: UniProt: O00287; RFXAP_HUMAN: 123
Feature           /change: S -> TAGAPGGGAA VGAAX
Ethnic origin   North Africa
//