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SBDSbase
Variation registry for Shwachman-Diamond syndrome

Nucleotide substitutions - SBDSbase

Purines/Pyrimidines
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0	7	2	3	12
G	4	0	2	1	7
C	0	2	0	5	7
T	0	0	246	0	246
Total	4	9	250	9	272

Amino/Keto
	Amino		Keto
-->	A	C	G	T	Total
A	0	2	7	3	12
C	0	0	2	5	7
G	4	2	0	1	7
T	0	246	0	0	246
Total	4	250	9	9	272

Weak/Strong
	Weak		Strong
-->	A	T	C	G	Total
A	0	3	2	7	12
T	0	0	246	0	246
C	0	5	0	2	7
G	4	1	2	0	7
Total	4	9	250	9	272

Purines/Pyrimidines (%)
	Purines		Pyrimidines
-->	A	G	C	T	Total
A	0.0	2.6	0.7	1.1	4.4
G	1.5	0.0	0.7	0.4	2.6
C	0.0	0.7	0.0	1.8	2.6
T	0.0	0.0	90.4	0.0	90.4
Total	1.5	3.3	91.9	3.3	100.0

Amino/Keto (%)
	Amino		Keto
-->	A	C	G	T	Total
A	0.0	0.7	2.6	1.1	4.4
C	0.0	0.0	0.7	1.8	2.6
G	1.5	0.7	0.0	0.4	2.6
T	0.0	90.4	0.0	0.0	90.4
Total	1.5	91.9	3.3	3.3	100.0

Weak/Strong (%)
	Weak		Strong
-->	A	T	C	G	Total
A	0.0	1.1	0.7	2.6	4.4
T	0.0	0.0	90.4	0.0	90.4
C	0.0	1.8	0.0	0.7	2.6
G	1.5	0.4	0.7	0.0	2.6
Total	1.5	3.3	91.9	3.3	100.0

Transitions and Transversions
-->	Purine	Pyrimidine
Purine	11	8
Pyrimidine	2	251

Transitions and Transversions (%)
-->	Purine	Pyrimidine
Purine	4.0	2.9
Pyrimidine	0.7	92.3

This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024