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 - databases for immunodeficiency-causing variations

   TAZbase
   Variation registry for  Barth syndrome


Codon changes - TAZbase

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                 1                                               1
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                      1                                          1
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc  1                                                              1
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                   3                                             3
cag                                                   1             1
cat                                                                 0
cca                                                                 0
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                             2                           1       3
cgc                                                                 0
cgg                                                                 0
cgt            1                                               1    2
cta                                                                 0
ctc                                                                 0
ctg                       1   1                                     2
ctt                                                                 0
gaa                                                 6               6
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga         1                                                       1
ggc                                                                 0
ggg           13                       2           1                 16
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                           1                     1
gtt                                                                 0
taa                                                                 0
tac                                                   5             5
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                            1                                    1
tta                                                                 0
ttc              2                                                  2
ttg                                                                 0
ttt                                                                 0
Total 0100000010131020010300110001120000020000000100010606000001001000046

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                 2                                               2
aac                                                                 0
aag                                                                 0
aat                                                                 0
aca                                                                 0
acc                      2                                          2
acg                                                                 0
act                                                                 0
aga                                                                 0
agc                                                                 0
agg                                                                 0
agt                                                                 0
ata                                                                 0
atc  2                                                              2
atg                                                                 0
att                                                                 0
caa                                                                 0
cac                   7                                             7
cag                                                   2             2
cat                                                                 0
cca                                                                 0
ccc                                                                 0
ccg                                                                 0
cct                                                                 0
cga                             4                           2       7
cgc                                                                 0
cgg                                                                 0
cgt            2                                               2    4
cta                                                                 0
ctc                                                                 0
ctg                       2   2                                     4
ctt                                                                 0
gaa                                                 13               13
gac                                                                 0
gag                                                                 0
gat                                                                 0
gca                                                                 0
gcc                                                                 0
gcg                                                                 0
gct                                                                 0
gga         2                                                       2
ggc                                                                 0
ggg           28                       4           2                 35
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg                                           2                     2
gtt                                                                 0
taa                                                                 0
tac                                                   11             11
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                                                                 0
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                                 0
tgg                                                                 0
tgt                            2                                    2
tta                                                                 0
ttc              4                                                  4
ttg                                                                 0
ttt                                                                 0
Total 0200000020282040020700220002240000040000000200020130130000020020000100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024