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 - databases for immunodeficiency-causing variations

   WASbase
   Variation registry for  Wiskott-Aldrich syndrome (WAS)


Codon changes - WASbase

  a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag       2                                                         2
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg   1           13                                                 14
act                1                       1                        2
aga 1                                                               1
agc                                                                 0
agg                                                                 0
agt        1                                                   1    2
ata                                                                 0
atc  2       1                                                      3
atg       1     2                                 1                 4
att        2                                                        2
caa                                                                 0
cac                                                                 0
cag                           1                       4             5
cat    1                                                            1
cca                                                                 0
ccc      2                   3           1                          6
ccg                                                                 0
cct                                                        2        2
cga                                                         22       22
cgc                  9           1           1               24      35
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                              1  1
ctg                       2                                         2
ctt                        7                                        7
gaa                                                                 0
gac  2                                       3                      5
gag   5                                1              3             9
gat                    1                       2                    3
gca                                                                 0
gcc                                  1                              1
gcg                                               5                 5
gct                                            1                    1
gga         1                                               1       2
ggc                                  1                              1
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               22                                               1 23
gtt                                                                11
taa                                                                 0
tac                                                 1        2      3
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                      1                                       2  3
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                  3              3
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                                 1
Total 1461023311002035109010127031001000201010104030060137000022426010311172

-->(%) a
a
a		 a
a
c		 a
a
g		 a
a
t		 a
c
a		 a
c
c		 a
c
g		 a
c
t		 a
g
a		 a
g
c		 a
g
g		 a
g
t		 a
t
a		 a
t
c		 a
t
g		 a
t
t		 c
a
a		 c
a
c		 c
a
g		 c
a
t		 c
c
a		 c
c
c		 c
c
g		 c
c
t		 c
g
a		 c
g
c		 c
g
g		 c
g
t		 c
t
a		 c
t
c		 c
t
g		 c
t
t		 g
a
a		 g
a
c		 g
a
g		 g
a
t		 g
c
a		 g
c
c		 g
c
g		 g
c
t		 g
g
a		 g
g
c		 g
g
g		 g
g
t		 g
t
a		 g
t
c		 g
t
g		 g
t
t		 t
a
a		 t
a
c		 t
a
g		 t
a
t		 t
c
a		 t
c
c		 t
c
g		 t
c
t		 t
g
a		 t
g
c		 t
g
g		 t
g
t		 t
t
a		 t
t
c		 t
t
g		 t
t
t		 Total
aaa                                                                 0
aac                                                                 0
aag       1                                                         1
aat                                                                 0
aca                                                                 0
acc                                                                 0
acg   1           8                                                 8
act                1                       1                        1
aga 1                                                               1
agc                                                                 0
agg                                                                 0
agt        1                                                   1    1
ata                                                                 0
atc  1       1                                                      2
atg       1     1                                 1                 2
att        1                                                        1
caa                                                                 0
cac                                                                 0
cag                           1                       2             3
cat    1                                                            1
cca                                                                 0
ccc      1                   2           1                          3
ccg                                                                 0
cct                                                        1        1
cga                                                         13       13
cgc                  5           1           1               14      20
cgg                                                                 0
cgt                                                                 0
cta                                                                 0
ctc                                                              1  1
ctg                       1                                         1
ctt                        4                                        4
gaa                                                                 0
gac  1                                       2                      3
gag   3                                1              2             5
gat                    1                       1                    2
gca                                                                 0
gcc                                  1                              1
gcg                                               3                 3
gct                                            1                    1
gga         1                                               1       1
ggc                                  1                              1
ggg                                                                 0
ggt                                                                 0
gta                                                                 0
gtc                                                                 0
gtg               13                                               1 13
gtt                                                                11
taa                                                                 0
tac                                                 1        1      2
tag                                                                 0
tat                                                                 0
tca                                                                 0
tcc                      1                                       1  2
tcg                                                                 0
tct                                                                 0
tga                                                                 0
tgc                                                  2              2
tgg                                                                 0
tgt                                                                 0
tta                                                                 0
ttc                                                                 0
ttg                                                                 0
ttt                                                                 1
Total 1231012211001020105010114021001000101010102020030124000011415010211100
    indicates codon change that require more complex mutation than single nucleotide substitution.
    indicates codon change that single nucleotide doesn't change amino acid (silent mutation).


This site is updated by Gerard Schaafsma
© Protein Structure and Bioinformatics, Lund University, 2017
Last modified 17.04.2024